HL_3J6B_055
3D structure
- PDB id
- 3J6B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial large ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGCAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J6B_055 not in the Motif Atlas
- Geometric match to HL_5B2P_001
- Geometric discrepancy: 0.1011
- The information below is about HL_5B2P_001
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
3J6B|1|A|C|2925
3J6B|1|A|G|2926
3J6B|1|A|C|2927
3J6B|1|A|A|2928
3J6B|1|A|A|2929
3J6B|1|A|G|2930
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain F
- 54S ribosomal protein L6, mitochondrial
Coloring options: