HL_3J71_012

3D structure

PDB id

3J71 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GCGGACUGUCCCCAGUGCGC

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J71|1|5|G|1171
3J71|1|5|C|1172
3J71|1|5|G|1173
3J71|1|5|G|1174
3J71|1|5|A|1175
3J71|1|5|C|1176
3J71|1|5|U|1177
3J71|1|5|G|1178
3J71|1|5|U|1179
3J71|1|5|C|1180
3J71|1|5|C|1181
3J71|1|5|C|1182
3J71|1|5|C|1183
3J71|1|5|A|1184
3J71|1|5|G|1185
3J71|1|5|U|1186
3J71|1|5|G|1187
3J71|1|5|C|1188
3J71|1|5|G|1189
3J71|1|5|C|1190

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 7

5S ribosomal RNA; 5S rRNA

Chain D

Ribosomal protein uL18