HL_3J71_080
3D structure
- PDB id
- 3J71 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CUGAAUGUCAAAGUGAAGAAAUUCAAUGAAGCGCG
- Length
- 35 nucleotides
- Bulged bases
- 3J71|1|5|U|3709, 3J71|1|5|A|3712, 3J71|1|5|U|3713
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J71|1|5|C|3708
3J71|1|5|U|3709
3J71|1|5|G|3710
3J71|1|5|A|3711
3J71|1|5|A|3712
3J71|1|5|U|3713
3J71|1|5|G|3714
3J71|1|5|U|3715
3J71|1|5|C|3716
3J71|1|5|A|3717
3J71|1|5|A|3718
3J71|1|5|A|3719
3J71|1|5|G|3720
3J71|1|5|U|3721
3J71|1|5|G|3722
3J71|1|5|A|3723
3J71|1|5|A|3724
3J71|1|5|G|3725
3J71|1|5|A|3726
3J71|1|5|A|3727
3J71|1|5|A|3728
3J71|1|5|U|3729
3J71|1|5|U|3730
3J71|1|5|C|3731
3J71|1|5|A|3732
3J71|1|5|A|3733
3J71|1|5|U|3734
3J71|1|5|G|3735
3J71|1|5|A|3736
3J71|1|5|A|3737
3J71|1|5|G|3738
3J71|1|5|C|3739
3J71|1|5|G|3740
3J71|1|5|C|3741
3J71|1|5|G|3742
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain A
- Ribosomal protein uL12
- Chain i
- Ribosomal protein eL36
- Chain o
- Ribosomal protein eL42
Coloring options: