HL_3J72_012

3D structure

PDB id

3J72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the idle mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GCGGACUGUCCCCAGUGCGC

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J72|1|5|G|1171
3J72|1|5|C|1172
3J72|1|5|G|1173
3J72|1|5|G|1174
3J72|1|5|A|1175
3J72|1|5|C|1176
3J72|1|5|U|1177
3J72|1|5|G|1178
3J72|1|5|U|1179
3J72|1|5|C|1180
3J72|1|5|C|1181
3J72|1|5|C|1182
3J72|1|5|C|1183
3J72|1|5|A|1184
3J72|1|5|G|1185
3J72|1|5|U|1186
3J72|1|5|G|1187
3J72|1|5|C|1188
3J72|1|5|G|1189
3J72|1|5|C|1190

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 7

5S ribosomal RNA; 5S rRNA

Chain D

Ribosomal protein uL18