HL_3J72_050

3D structure

PDB id

3J72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the idle mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCAAAUGCCUCGUCAUCUAAUUAGUGACGCG

Length

31 nucleotides

Bulged bases

3J72|1|5|A|3785, 3J72|1|5|C|3810

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J72|1|5|C|3781
3J72|1|5|C|3782
3J72|1|5|A|3783
3J72|1|5|A|3784
3J72|1|5|A|3785
3J72|1|5|U|3786
3J72|1|5|G|3787
3J72|1|5|C|3788
3J72|1|5|C|3789
3J72|1|5|U|3790
3J72|1|5|C|3791
3J72|1|5|G|3792
3J72|1|5|U|3793
3J72|1|5|C|3794
3J72|1|5|A|3795
3J72|1|5|U|3796
3J72|1|5|C|3797
3J72|1|5|U|3798
3J72|1|5|A|3799
3J72|1|5|A|3800
3J72|1|5|U|3801
3J72|1|5|U|3802
3J72|1|5|A|3803
3J72|1|5|G|3804
3J72|1|5|U|3805
3J72|1|5|G|3806
3J72|1|5|A|3807
3J72|1|5|C|3808
3J72|1|5|G|3809
3J72|1|5|C|3810
3J72|1|5|G|3811

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain V

Ribosomal protein uL14

Chain n

Ribosomal protein eL41