3D structure

PDB id
3J72 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the idle mammalian ribosome-Sec61 complex
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
UGACUGAACGCCUCUAAGUCA
Length
21 nucleotides
Bulged bases
3J72|1|5|G|4694
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J72|1|5|U|4685
3J72|1|5|G|4686
3J72|1|5|A|4687
3J72|1|5|C|4688
3J72|1|5|U|4689
3J72|1|5|G|4690
3J72|1|5|A|4691
3J72|1|5|A|4692
3J72|1|5|C|4693
3J72|1|5|G|4694
3J72|1|5|C|4695
3J72|1|5|C|4696
3J72|1|5|U|4697
3J72|1|5|C|4698
3J72|1|5|U|4699
3J72|1|5|A|4700
3J72|1|5|A|4701
3J72|1|5|G|4702
3J72|1|5|U|4703
3J72|1|5|C|4704
3J72|1|5|A|4705

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain H
Ribosomal protein uL6
Chain O
Ribosomal protein uL13
Chain m
Ribosomal protein eL40

Coloring options:

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