3D structure

PDB id
3J72 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the idle mammalian ribosome-Sec61 complex
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
CAGCUCCCUCGCUG
Length
14 nucleotides
Bulged bases
3J72|1|5|C|5027
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J72|1|5|C|5018
3J72|1|5|A|5019
3J72|1|5|G|5020
3J72|1|5|C|5021
3J72|1|5|U|5022
3J72|1|5|C|5023
3J72|1|5|C|5024
3J72|1|5|C|5025
3J72|1|5|U|5026
3J72|1|5|C|5027
3J72|1|5|G|5028
3J72|1|5|C|5029
3J72|1|5|U|5030
3J72|1|5|G|5031

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain R
Ribosomal protein eL19
Chain U
Ribosomal protein eL22

Coloring options:

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