HL_3J7Q_090

3D structure

PDB id

3J7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the idle mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCAAGCGUUCAUAGCGACG

Length

19 nucleotides

Bulged bases

3J7Q|1|5|U|4419

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J7Q|1|5|C|4412
3J7Q|1|5|C|4413
3J7Q|1|5|A|4414
3J7Q|1|5|A|4415
3J7Q|1|5|G|4416
3J7Q|1|5|C|4417
3J7Q|1|5|G|4418
3J7Q|1|5|U|4419
3J7Q|1|5|U|4420
3J7Q|1|5|C|4421
3J7Q|1|5|A|4422
3J7Q|1|5|U|4423
3J7Q|1|5|A|4424
3J7Q|1|5|G|4425
3J7Q|1|5|C|4426
3J7Q|1|5|G|4427
3J7Q|1|5|A|4428
3J7Q|1|5|C|4429
3J7Q|1|5|G|4430

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain H

Ribosomal protein uL6

Chain I

Ribosomal protein uL16

Chain m

Ribosomal protein eL40