3D structure

PDB id
3J7Q (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the idle mammalian ribosome-Sec61 complex
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
AGCUCCCUCGCU
Length
12 nucleotides
Bulged bases
3J7Q|1|5|U|5026, 3J7Q|1|5|C|5027
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J7Q|1|5|A|5019
3J7Q|1|5|G|5020
3J7Q|1|5|C|5021
3J7Q|1|5|U|5022
3J7Q|1|5|C|5023
3J7Q|1|5|C|5024
3J7Q|1|5|C|5025
3J7Q|1|5|U|5026
3J7Q|1|5|C|5027
3J7Q|1|5|G|5028
3J7Q|1|5|C|5029
3J7Q|1|5|U|5030

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain R
Ribosomal protein eL19
Chain U
Ribosomal protein eL22

Coloring options:

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