HL_3J7R_003
3D structure
- PDB id
- 3J7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGGCGAG
- Length
- 7 nucleotides
- Bulged bases
- 3J7R|1|5|C|92
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J7R_003 not in the Motif Atlas
- Homologous match to HL_8C3A_003
- Geometric discrepancy: 0.3195
- The information below is about HL_8C3A_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_67216.9
- Basepair signature
- cWW-cWW-F-tSH
- Number of instances in this motif group
- 9
Unit IDs
3J7R|1|5|C|89
3J7R|1|5|G|90
3J7R|1|5|G|91
3J7R|1|5|C|92
3J7R|1|5|G|93
3J7R|1|5|A|94
3J7R|1|5|G|95
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain L
- Ribosomal protein eL13
- Chain Q
- Ribosomal protein eL18
- Chain S6
- Transfer RNA; tRNA
- Chain a
- Ribosomal protein uL15
- Chain o
- Ribosomal protein eL42
Coloring options: