HL_3J7R_008

3D structure

PDB id

3J7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUUGGGAAUG

Length

10 nucleotides

Bulged bases

3J7R|1|5|A|295, 3J7R|1|5|A|296

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J7R|1|5|C|289
3J7R|1|5|U|290
3J7R|1|5|U|291
3J7R|1|5|G|292
3J7R|1|5|G|293
3J7R|1|5|G|294
3J7R|1|5|A|295
3J7R|1|5|A|296
3J7R|1|5|U|297
3J7R|1|5|G|298

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain L

Ribosomal protein eL13

Chain N

Ribosomal protein eL15

Chain a

Ribosomal protein uL15

Chain o

Ribosomal protein eL42