HL_3J7R_088
3D structure
- PDB id
- 3J7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UCCACUUUAAAUCCUUCCG
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J7R_088 not in the Motif Atlas
- Geometric match to HL_4WF9_003
- Geometric discrepancy: 0.2426
- The information below is about HL_4WF9_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 19
Unit IDs
3J7R|1|S2|U|566
3J7R|1|S2|C|567
3J7R|1|S2|C|568
3J7R|1|S2|A|569
3J7R|1|S2|C|570
3J7R|1|S2|U|571
3J7R|1|S2|U|572
3J7R|1|S2|U|573
3J7R|1|S2|A|574
3J7R|1|S2|A|575
3J7R|1|S2|A|576
3J7R|1|S2|U|577
3J7R|1|S2|C|578
3J7R|1|S2|C|579
3J7R|1|S2|U|580
3J7R|1|S2|U|581
3J7R|1|S2|C|582
3J7R|1|S2|C|583
3J7R|1|S2|G|584
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SJ
- Ribosomal protein uS4
- Chain SY
- Ribosomal protein eS24
Coloring options: