HL_3J7R_091

3D structure

PDB id

3J7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCUCUCGGCGGGGCCCGAAG*G

Length

21 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J7R|1|S2|C|745
3J7R|1|S2|C|746
3J7R|1|S2|U|747
3J7R|1|S2|C|748
3J7R|1|S2|U|749
3J7R|1|S2|C|750
3J7R|1|S2|G|751
3J7R|1|S2|G|752
3J7R|1|S2|C|753
3J7R|1|S2|G|786
3J7R|1|S2|G|787
3J7R|1|S2|G|788
3J7R|1|S2|G|789
3J7R|1|S2|C|790
3J7R|1|S2|C|791
3J7R|1|S2|C|792
3J7R|1|S2|G|793
3J7R|1|S2|A|794
3J7R|1|S2|A|795
3J7R|1|S2|G|796
*
3J7R|1|S2|G|796

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SE

Ribosomal protein eS4

Chain SG

Ribosomal protein eS6

Chain SH

Ribosomal protein eS7

Chain SL

Ribosomal protein uS17