HL_3J7R_100
3D structure
- PDB id
- 3J7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GGACAGGAUUGACAGAUUGAUAGCUCUUUCUCGAUUCC
- Length
- 38 nucleotides
- Bulged bases
- 3J7R|1|S2|C|1283, 3J7R|1|S2|G|1285, 3J7R|1|S2|C|1292, 3J7R|1|S2|U|1300
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J7R|1|S2|G|1280
3J7R|1|S2|G|1281
3J7R|1|S2|A|1282
3J7R|1|S2|C|1283
3J7R|1|S2|A|1284
3J7R|1|S2|G|1285
3J7R|1|S2|G|1286
3J7R|1|S2|A|1287
3J7R|1|S2|U|1288
3J7R|1|S2|U|1289
3J7R|1|S2|G|1290
3J7R|1|S2|A|1291
3J7R|1|S2|C|1292
3J7R|1|S2|A|1293
3J7R|1|S2|G|1294
3J7R|1|S2|A|1295
3J7R|1|S2|U|1296
3J7R|1|S2|U|1297
3J7R|1|S2|G|1298
3J7R|1|S2|A|1299
3J7R|1|S2|U|1300
3J7R|1|S2|A|1301
3J7R|1|S2|G|1302
3J7R|1|S2|C|1303
3J7R|1|S2|U|1304
3J7R|1|S2|C|1305
3J7R|1|S2|U|1306
3J7R|1|S2|U|1307
3J7R|1|S2|U|1308
3J7R|1|S2|C|1309
3J7R|1|S2|U|1310
3J7R|1|S2|C|1311
3J7R|1|S2|G|1312
3J7R|1|S2|A|1313
3J7R|1|S2|U|1314
3J7R|1|S2|U|1315
3J7R|1|S2|C|1316
3J7R|1|S2|C|1317
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SK
- Ribosomal protein eS10
- Chain SM
- Ribosomal protein eS12
- Chain SP
- Ribosomal protein uS19
- Chain Sd
- Ribosomal protein uS14
- Chain Sf
- Ribosomal protein eS31
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