3D structure

PDB id
3J7R (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the translating mammalian ribosome-Sec61 complex
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
UAGUCGCCGUGCCUA
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J7R|1|S2|U|375
3J7R|1|S2|A|376
3J7R|1|S2|G|377
3J7R|1|S2|U|378
3J7R|1|S2|C|379
3J7R|1|S2|G|380
3J7R|1|S2|C|381
3J7R|1|S2|C|382
3J7R|1|S2|G|383
3J7R|1|S2|U|384
3J7R|1|S2|G|385
3J7R|1|S2|C|386
3J7R|1|S2|C|387
3J7R|1|S2|U|388
3J7R|1|S2|A|389

Current chains

Chain S2
18S ribosomal RNA

Nearby chains

Chain SI
Ribosomal protein eS8
Chain SL
Ribosomal protein uS17

Coloring options:

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