HL_3J9Y_087

3D structure

PDB id

3J9Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

3J9Y|1|a|U|842

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9Y|1|a|C|840
3J9Y|1|a|C|841
3J9Y|1|a|U|842
3J9Y|1|a|U|843
3J9Y|1|a|G|844
3J9Y|1|a|A|845
3J9Y|1|a|G|846

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain r

30S ribosomal protein S18