HL_3JAG_061

3D structure

PDB id

3JAG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

GCGCGCC

Length

7 nucleotides

Bulged bases

3JAG|1|5|C|4144

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JAG_061 not in the Motif Atlas

Geometric match to HL_8C3A_221

Geometric discrepancy: 0.3469

The information below is about HL_8C3A_221

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48417.3

Basepair signature

cWW-F-F

Number of instances in this motif group

23

Unit IDs

3JAG|1|5|G|4139
3JAG|1|5|C|4140
3JAG|1|5|G|4141
3JAG|1|5|C|4142
3JAG|1|5|G|4143
3JAG|1|5|C|4144
3JAG|1|5|C|4145

Current chains

Chain 5

28S ribosomal RNA

Nearby chains