HL_3JAH_094

3D structure

PDB id

3JAH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.45 Å

Loop

Sequence

CCAAGG

Length

6 nucleotides

Bulged bases

3JAH|1|9|A|464

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JAH_094 not in the Motif Atlas

Homologous match to HL_4V88_196

Geometric discrepancy: 0.2451

The information below is about HL_4V88_196

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

3JAH|1|9|C|462
3JAH|1|9|C|463
3JAH|1|9|A|464
3JAH|1|9|A|465
3JAH|1|9|G|466
3JAH|1|9|G|467

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain GG

eS6

Chain V

uL14

Chain jj

ABCE1