HL_3JAH_100

3D structure

PDB id

3JAH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.45 Å

Loop

Sequence

GGCGGGGCC*C

Length

10 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JAH_100 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.1844

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.3

Basepair signature

cWW-F

Number of instances in this motif group

5

Unit IDs

3JAH|1|9|G|751
3JAH|1|9|G|752
3JAH|1|9|C|753
3JAH|1|9|G|786
3JAH|1|9|G|787
3JAH|1|9|G|788
3JAH|1|9|G|789
3JAH|1|9|C|790
3JAH|1|9|C|791
*
3JAH|1|9|C|791

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain GG

eS6