HL_3JAI_002
3D structure
- PDB id
- 3JAI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- CCUAACACG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JAI_002 not in the Motif Atlas
- Homologous match to HL_4TUE_034
- Geometric discrepancy: 0.1385
- The information below is about HL_4TUE_034
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.6
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
3JAI|1|2|C|31
3JAI|1|2|C|32
3JAI|1|2|U|33
3JAI|1|2|A|34
3JAI|1|2|A|35
3JAI|1|2|C|36
3JAI|1|2|A|37
3JAI|1|2|C|38
3JAI|1|2|G|39
Current chains
- Chain 2
- tRNA(Val)
Nearby chains
- Chain 3
- Transfer RNA; tRNA
- Chain 9
- Small subunit ribosomal RNA; SSU rRNA
- Chain QQ
- uS9
- Chain hh
- mRNA
- Chain ii
- eRF1
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