HL_3JAI_058
3D structure
- PDB id
- 3JAI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- GGGAACGGGC
- Length
- 10 nucleotides
- Bulged bases
- 3JAI|1|5|A|3876, 3JAI|1|5|A|3877, 3JAI|1|5|C|3878
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JAI_058 not in the Motif Atlas
- Homologous match to HL_8C3A_051
- Geometric discrepancy: 0.0853
- The information below is about HL_8C3A_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_90642.8
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
3JAI|1|5|G|3873
3JAI|1|5|G|3874
3JAI|1|5|G|3875
3JAI|1|5|A|3876
3JAI|1|5|A|3877
3JAI|1|5|C|3878
3JAI|1|5|G|3879
3JAI|1|5|G|3880
3JAI|1|5|G|3881
3JAI|1|5|C|3882
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain B
- uL3
- Chain e
- eL32
Coloring options: