HL_3JAI_094

3D structure

PDB id

3JAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

CCAAGG

Length

6 nucleotides

Bulged bases

3JAI|1|9|A|464

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JAI_094 not in the Motif Atlas

Homologous match to HL_4V88_196

Geometric discrepancy: 0.2221

The information below is about HL_4V88_196

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

3JAI|1|9|C|462
3JAI|1|9|C|463
3JAI|1|9|A|464
3JAI|1|9|A|465
3JAI|1|9|G|466
3JAI|1|9|G|467

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain GG

eS6

Chain V

uL14

Chain jj

ABCE1