HL_3JAI_099

3D structure

PDB id

3JAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

GGCGUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JAI_099 not in the Motif Atlas

Geometric match to HL_1KH6_003

Geometric discrepancy: 0.2801

The information below is about HL_1KH6_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27483.1

Basepair signature

cWW-F

Number of instances in this motif group

2

Unit IDs

3JAI|1|9|G|697
3JAI|1|9|G|698
3JAI|1|9|C|730
3JAI|1|9|G|731
3JAI|1|9|U|732
3JAI|1|9|C|733

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain HH

eS7

Chain WW

uS8