HL_3JAI_100

3D structure

PDB id

3JAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

GGCGGGGCC*C

Length

10 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JAI_100 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.1846

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.2

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

3JAI|1|9|G|751
3JAI|1|9|G|752
3JAI|1|9|C|753
3JAI|1|9|G|786
3JAI|1|9|G|787
3JAI|1|9|G|788
3JAI|1|9|G|789
3JAI|1|9|C|790
3JAI|1|9|C|791
*
3JAI|1|9|C|791

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain GG

eS6