HL_3JAI_102

3D structure

PDB id

3JAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

CCCGAGCCG

Length

9 nucleotides

Bulged bases

3JAI|1|9|G|836

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JAI_102 not in the Motif Atlas

Homologous match to HL_8P9A_207

Geometric discrepancy: 0.5847

The information below is about HL_8P9A_207

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48417.5

Basepair signature

cWW-F-F

Number of instances in this motif group

26

Unit IDs

3JAI|1|9|C|833
3JAI|1|9|C|834
3JAI|1|9|C|835
3JAI|1|9|G|836
3JAI|1|9|A|837
3JAI|1|9|G|838
3JAI|1|9|C|839
3JAI|1|9|C|840
3JAI|1|9|G|841

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain EE

eS4

Chain YY

eS24