HL_3JAI_122

3D structure

PDB id

3JAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

GUGGCCAUGGAAGUCGGAAUC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAI|1|5|G|1973
3JAI|1|5|U|1974
3JAI|1|5|G|1975
3JAI|1|5|G|1976
3JAI|1|5|C|1977
3JAI|1|5|C|1978
3JAI|1|5|A|1979
3JAI|1|5|U|1980
3JAI|1|5|G|1981
3JAI|1|5|G|1982
3JAI|1|5|A|1983
3JAI|1|5|A|1984
3JAI|1|5|G|1985
3JAI|1|5|U|1986
3JAI|1|5|C|1987
3JAI|1|5|G|1988
3JAI|1|5|G|1989
3JAI|1|5|A|1990
3JAI|1|5|A|1991
3JAI|1|5|U|1992
3JAI|1|5|C|1993

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain I

uL16

Chain ii

eRF1

Chain s

uL10

Chain t

uL11