HL_3JAJ_076

3D structure

PDB id

3JAJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the engaged state of the mammalian SRP-ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

UUCGUAGACGACCUG

Length

15 nucleotides

Bulged bases

3JAJ|1|5|U|4976

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAJ|1|5|U|4972
3JAJ|1|5|U|4973
3JAJ|1|5|C|4974
3JAJ|1|5|G|4975
3JAJ|1|5|U|4976
3JAJ|1|5|A|4977
3JAJ|1|5|G|4978
3JAJ|1|5|A|4979
3JAJ|1|5|C|4980
3JAJ|1|5|G|4981
3JAJ|1|5|A|4982
3JAJ|1|5|C|4983
3JAJ|1|5|C|4984
3JAJ|1|5|U|4985
3JAJ|1|5|G|4986

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain B

Ribosomal protein uL3

Chain P

Ribosomal protein uL22

Chain d

Ribosomal protein eL31