HL_3JAJ_099

3D structure

PDB id

3JAJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the engaged state of the mammalian SRP-ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

CCUCUCGGCGGGGCCCGAAG*G

Length

21 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JAJ|1|S2|C|745
3JAJ|1|S2|C|746
3JAJ|1|S2|U|747
3JAJ|1|S2|C|748
3JAJ|1|S2|U|749
3JAJ|1|S2|C|750
3JAJ|1|S2|G|751
3JAJ|1|S2|G|752
3JAJ|1|S2|C|753
3JAJ|1|S2|G|786
3JAJ|1|S2|G|787
3JAJ|1|S2|G|788
3JAJ|1|S2|G|789
3JAJ|1|S2|C|790
3JAJ|1|S2|C|791
3JAJ|1|S2|C|792
3JAJ|1|S2|G|793
3JAJ|1|S2|A|794
3JAJ|1|S2|A|795
3JAJ|1|S2|G|796
*
3JAJ|1|S2|G|796

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SE

Ribosomal protein eS4

Chain SG

Ribosomal protein eS6

Chain SH

Ribosomal protein eS7

Chain SL

Ribosomal protein uS17