HL_3JAJ_130
3D structure
- PDB id
- 3JAJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the engaged state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- CCAAAUGCCUCGUCAUCUAAUUAGUGACGCG
- Length
- 31 nucleotides
- Bulged bases
- 3JAJ|1|5|A|3785, 3JAJ|1|5|C|3791, 3JAJ|1|5|U|3802, 3JAJ|1|5|C|3810
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAJ|1|5|C|3781
3JAJ|1|5|C|3782
3JAJ|1|5|A|3783
3JAJ|1|5|A|3784
3JAJ|1|5|A|3785
3JAJ|1|5|U|3786
3JAJ|1|5|G|3787
3JAJ|1|5|C|3788
3JAJ|1|5|C|3789
3JAJ|1|5|U|3790
3JAJ|1|5|C|3791
3JAJ|1|5|G|3792
3JAJ|1|5|U|3793
3JAJ|1|5|C|3794
3JAJ|1|5|A|3795
3JAJ|1|5|U|3796
3JAJ|1|5|C|3797
3JAJ|1|5|U|3798
3JAJ|1|5|A|3799
3JAJ|1|5|A|3800
3JAJ|1|5|U|3801
3JAJ|1|5|U|3802
3JAJ|1|5|A|3803
3JAJ|1|5|G|3804
3JAJ|1|5|U|3805
3JAJ|1|5|G|3806
3JAJ|1|5|A|3807
3JAJ|1|5|C|3808
3JAJ|1|5|G|3809
3JAJ|1|5|C|3810
3JAJ|1|5|G|3811
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
- Chain V
- Ribosomal protein uL14
- Chain n
- Ribosomal protein eL41
Coloring options: