3D structure

PDB id
3JCD (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
GCAAGGGGGUCAUCCCGACUUACCAACC
Length
28 nucleotides
Bulged bases
3JCD|1|A|A|896
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3JCD|1|A|G|875
3JCD|1|A|C|876
3JCD|1|A|A|877
3JCD|1|A|A|878
3JCD|1|A|G|879
3JCD|1|A|G|880
3JCD|1|A|G|881
3JCD|1|A|G|882
3JCD|1|A|G|883
3JCD|1|A|U|884
3JCD|1|A|C|885
3JCD|1|A|A|886
3JCD|1|A|U|887
3JCD|1|A|C|888
3JCD|1|A|C|889
3JCD|1|A|C|890
3JCD|1|A|G|891
3JCD|1|A|A|892
3JCD|1|A|C|893
3JCD|1|A|U|894
3JCD|1|A|U|895
3JCD|1|A|A|896
3JCD|1|A|C|897
3JCD|1|A|C|898
3JCD|1|A|A|899
3JCD|1|A|A|900
3JCD|1|A|C|901
3JCD|1|A|C|902

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain m
30S ribosomal protein S13
Chain s
30S ribosomal protein S19

Coloring options:

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