HL_3JCD_089

3D structure

PDB id

3JCD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AGUAAAGUUAAUACCUUUGCU

Length

21 nucleotides

Bulged bases

3JCD|1|a|A|461

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCD|1|a|A|456
3JCD|1|a|G|457
3JCD|1|a|U|458
3JCD|1|a|A|459
3JCD|1|a|A|460
3JCD|1|a|A|461
3JCD|1|a|G|462
3JCD|1|a|U|463
3JCD|1|a|U|464
3JCD|1|a|A|465
3JCD|1|a|A|466
3JCD|1|a|U|467
3JCD|1|a|A|468
3JCD|1|a|C|469
3JCD|1|a|C|470
3JCD|1|a|U|471
3JCD|1|a|U|472
3JCD|1|a|U|473
3JCD|1|a|G|474
3JCD|1|a|C|475
3JCD|1|a|U|476

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain p

30S ribosomal protein S16