HL_3JCD_107

3D structure

PDB id

3JCD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGAUCAGAAUGCC

Length

13 nucleotides

Bulged bases

3JCD|1|a|U|1364

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCD|1|a|G|1355
3JCD|1|a|G|1356
3JCD|1|a|A|1357
3JCD|1|a|U|1358
3JCD|1|a|C|1359
3JCD|1|a|A|1360
3JCD|1|a|G|1361
3JCD|1|a|A|1362
3JCD|1|a|A|1363
3JCD|1|a|U|1364
3JCD|1|a|G|1365
3JCD|1|a|C|1366
3JCD|1|a|C|1367

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain i

30S ribosomal protein S9

Chain j

30S ribosomal protein S10

Chain n

30S ribosomal protein S14