HL_3JCD_108
3D structure
- PDB id
- 3JCD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CUUCGG
- Length
- 6 nucleotides
- Bulged bases
- 3JCD|1|a|U|1451
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JCD_108 not in the Motif Atlas
- Homologous match to HL_4LFB_031
- Geometric discrepancy: 0.3855
- The information below is about HL_4LFB_031
- Detailed Annotation
- UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_34617.5
- Basepair signature
- cWW-tSW-F
- Number of instances in this motif group
- 57
Unit IDs
3JCD|1|a|C|1449
3JCD|1|a|U|1450
3JCD|1|a|U|1451
3JCD|1|a|C|1452
3JCD|1|a|G|1453
3JCD|1|a|G|1454
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: