HL_3JCT_052

3D structure

PDB id

3JCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-em structure of eukaryotic pre-60S ribosomal subunits

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

GAAUUCAUUUUC

Length

12 nucleotides

Bulged bases

3JCT|1|1|C|2539, 3JCT|1|1|A|2540

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCT|1|1|G|2534
3JCT|1|1|A|2535
3JCT|1|1|A|2536
3JCT|1|1|U|2537
3JCT|1|1|U|2538
3JCT|1|1|C|2539
3JCT|1|1|A|2540
3JCT|1|1|U|2541
3JCT|1|1|U|2542
3JCT|1|1|U|2543
3JCT|1|1|U|2544
3JCT|1|1|C|2545

Current chains

Chain 1

RDN25-1 rRNA

Nearby chains

Chain A

60S ribosomal protein L2-A

Chain G

60S ribosomal protein L8-A

Chain g

60S ribosomal protein L34-A