HL_3JCT_078

3D structure

PDB id

3JCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-em structure of eukaryotic pre-60S ribosomal subunits

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

AGUUAUCUUUU

Length

11 nucleotides

Bulged bases

3JCT|1|1|U|1687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCT|1|1|A|1679
3JCT|1|1|G|1680
3JCT|1|1|U|1681
3JCT|1|1|U|1682
3JCT|1|1|A|1683
3JCT|1|1|U|1684
3JCT|1|1|C|1685
3JCT|1|1|U|1686
3JCT|1|1|U|1687
3JCT|1|1|U|1688
3JCT|1|1|U|1689

Current chains

Chain 1

RDN25-1 rRNA

Nearby chains

Chain R

60S ribosomal protein L19-A

Chain U

60S ribosomal protein L22-A

Chain b

Nucleolar GTP-binding protein 1

Chain u

Ribosome biogenesis protein RLP24