HL_3JD5_002
3D structure
- PDB id
- 3JD5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the small subunit of the mammalian mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7 Å
Loop
- Sequence
- UCUAGGUUAUUAAAACUAAGA
- Length
- 21 nucleotides
- Bulged bases
- 3JD5|1|A|U|90
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JD5|1|A|U|80
3JD5|1|A|C|81
3JD5|1|A|U|82
3JD5|1|A|A|83
3JD5|1|A|G|84
3JD5|1|A|G|85
3JD5|1|A|U|86
3JD5|1|A|U|87
3JD5|1|A|A|88
3JD5|1|A|U|89
3JD5|1|A|U|90
3JD5|1|A|A|91
3JD5|1|A|A|92
3JD5|1|A|A|93
3JD5|1|A|A|94
3JD5|1|A|C|95
3JD5|1|A|U|96
3JD5|1|A|A|97
3JD5|1|A|A|98
3JD5|1|A|G|99
3JD5|1|A|A|100
Current chains
- Chain A
- 28S ribosomal RNA, mitochondial
Nearby chains
- Chain P
- 28S ribosomal protein S16, mitochondrial
- Chain Q
- 28S ribosomal protein S17, mitochondrial
- Chain c
- 28S ribosomal protein S25, mitochondrial
- Chain d
- 28S ribosomal protein S26, mitochondrial
- Chain j
- 28S ribosomal protein S34, mitochondrial
Coloring options: