HL_3JD5_005
3D structure
- PDB id
- 3JD5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the small subunit of the mammalian mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7 Å
Loop
- Sequence
- UAAAUCUCGUGCCAGCCA
- Length
- 18 nucleotides
- Bulged bases
- 3JD5|1|A|C|239, 3JD5|1|A|C|244
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JD5|1|A|U|228
3JD5|1|A|A|229
3JD5|1|A|A|230
3JD5|1|A|A|231
3JD5|1|A|U|232
3JD5|1|A|C|233
3JD5|1|A|U|234
3JD5|1|A|C|235
3JD5|1|A|G|236
3JD5|1|A|U|237
3JD5|1|A|G|238
3JD5|1|A|C|239
3JD5|1|A|C|240
3JD5|1|A|A|241
3JD5|1|A|G|242
3JD5|1|A|C|243
3JD5|1|A|C|244
3JD5|1|A|A|245
Current chains
- Chain A
- 28S ribosomal RNA, mitochondial
Nearby chains
- Chain E
- 28S ribosomal protein S5, mitochondrial
- Chain L
- 28S ribosomal protein S12, mitochondrial
- Chain i
- 28S ribosomal protein S33, mitochondrial
- Chain p
- 28S ribosomal protein S18b, mitochondrial
Coloring options: