HL_3JD5_018
3D structure
- PDB id
- 3JD5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the small subunit of the mammalian mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7 Å
Loop
- Sequence
- AUAAUUACAUAAACAAAAUUAU
- Length
- 22 nucleotides
- Bulged bases
- 3JD5|1|A|A|462, 3JD5|1|A|U|465, 3JD5|1|A|A|466, 3JD5|1|A|A|471
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JD5|1|A|A|456
3JD5|1|A|U|457
3JD5|1|A|A|458
3JD5|1|A|A|459
3JD5|1|A|U|460
3JD5|1|A|U|461
3JD5|1|A|A|462
3JD5|1|A|C|463
3JD5|1|A|A|464
3JD5|1|A|U|465
3JD5|1|A|A|466
3JD5|1|A|A|467
3JD5|1|A|A|468
3JD5|1|A|C|469
3JD5|1|A|A|470
3JD5|1|A|A|471
3JD5|1|A|A|472
3JD5|1|A|A|473
3JD5|1|A|U|474
3JD5|1|A|U|475
3JD5|1|A|A|476
3JD5|1|A|U|477
Current chains
- Chain A
- 28S ribosomal RNA, mitochondial
Nearby chains
- Chain B
- 28S ribosomal protein S2, mitochondrial
- Chain E
- 28S ribosomal protein S5, mitochondrial
- Chain F
- 28S ribosomal protein S6, mitochondrial
- Chain L
- 28S ribosomal protein S12, mitochondrial
- Chain Q
- 28S ribosomal protein S17, mitochondrial
- Chain b
- 28S ribosomal protein S23, mitochondrial
- Chain c
- 28S ribosomal protein S25, mitochondrial
- Chain m
- Coiled-coil-helix-coiled-coil-helix domain containing 1
Coloring options: