HL_3LA5_003

3D structure

PDB id

3LA5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

X-ray crystal structure of mc6 RNA Riboswitch bound to azacytosine

Experimental method

X-RAY DIFFRACTION

Resolution

1.7 Å

Loop

Sequence

GCCUUAAAC

Length

9 nucleotides

Bulged bases (A, C, G, U)

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_73266.6

Basepair signature

cWW-F-F-cSW-cSH-F

Number of instances in this motif group

10

Unit IDs

3LA5|1|A|G|59
3LA5|1|A|C|60
3LA5|1|A|C|61
3LA5|1|A|U|62
3LA5|1|A|U|63
3LA5|1|A|A|64
3LA5|1|A|A|65
3LA5|1|A|A|66
3LA5|1|A|C|67

Current chains

Chain A

Adenosine RIboswitch

Nearby chains