HL_3MOJ_002

3D structure

PDB id

3MOJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RNA binding domain of the Bacillus subtilis YxiN protein complexed with a fragment of 23S ribosomal RNA

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUGUUCG

Length

7 nucleotides

Bulged bases (A, C, G, U)

2552U, 2553G, 2554U

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_67667.1

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

3MOJ|1|A|C|2551
3MOJ|1|A|U|2552
3MOJ|1|A|G|2553
3MOJ|1|A|U|2554
3MOJ|1|A|U|2555
3MOJ|1|A|C|2556
3MOJ|1|A|G|2557

Current chains

Chain A

RNA (69-MER)

Nearby chains

Chain B

ATP-dependent RNA helicase dbpA