HL_3NVK_001
3D structure
- PDB id
- 3NVK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural basis for substrate placement by an archaeal box C/D ribonucleoprotein particle
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.21 Å
Loop
- Sequence
- CUGACCGAAAGGCGUGAUG
- Length
- 19 nucleotides
- Bulged bases
- 3NVK|1|K|U|19
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_36790.1
- Basepair signature
- F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 1
Unit IDs
3NVK|1|K|C|5
3NVK|1|K|U|6
3NVK|1|K|G|7
3NVK|1|K|A|8
3NVK|1|K|C|9
3NVK|1|K|C|10
3NVK|1|K|G|11
3NVK|1|K|A|12
3NVK|1|K|A|13
3NVK|1|K|A|14
3NVK|1|K|G|15
3NVK|1|K|G|16
3NVK|1|K|C|17
3NVK|1|K|G|18
3NVK|1|K|U|19
3NVK|1|K|G|20
3NVK|1|K|A|21
3NVK|1|K|U|22
3NVK|1|K|G|23
Current chains
- Chain K
- RNA (5'-R(*GP*CP*CP*GP*UP*UP*GP*AP*AP*GP*CP*UP*CP*UP*GP*AP*CP*CP*GP*AP*AP*AP*GP*GP*CP*GP*UP*GP*AP*UP*GP*AP*GP*C)-3')
Nearby chains
- Chain A
- NOP5/NOP56 related protein
- Chain E
- 50S ribosomal protein L7Ae
- Chain G
- RNA (5'-R(*GP*AP*GP*CP*UP*UP*CP*AP*AP*CP*GP*GP*C)-3')
- Chain I
- Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase
Coloring options: