HL_3O30_019

3D structure

PDB id

3O30 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome. This entry consists of the 40S subunit of the second 80S in the asymmetric unit.

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

CUAUUUUGUUGGUUUCUAG

Length

19 nucleotides

Bulged bases

None detected

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_35758.1

Basepair signature

Not available

Number of instances in this motif group

1

Unit IDs

3O30|1|1|C|827
3O30|1|1|U|828
3O30|1|1|A|829
3O30|1|1|U|830
3O30|1|1|U|831
3O30|1|1|U|832
3O30|1|1|U|833
3O30|1|1|G|834
3O30|1|1|U|835
3O30|1|1|U|836
3O30|1|1|G|837
3O30|1|1|G|838
3O30|1|1|U|839
3O30|1|1|U|840
3O30|1|1|U|841
3O30|1|1|C|842
3O30|1|1|U|843
3O30|1|1|A|844
3O30|1|1|G|845

Current chains

Chain 1

18S ribosomal RNA

Nearby chains