HL_3O58_020

3D structure

PDB id

3O58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome. This entry consists of the 60S subunit of the first 80S in the asymmetric unit.

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

ACGUGCAAAU

Length

10 nucleotides

Bulged bases

3O58|1|1|U|879, 3O58|1|1|A|883, 3O58|1|1|A|884

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32622.1

Basepair signature

Not available

Number of instances in this motif group

1

Unit IDs

3O58|1|1|A|876
3O58|1|1|C|877
3O58|1|1|G|878
3O58|1|1|U|879
3O58|1|1|G|880
3O58|1|1|C|881
3O58|1|1|A|882
3O58|1|1|A|883
3O58|1|1|A|884
3O58|1|1|U|885

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain C

60S ribosomal protein L3

Chain Q

60S ribosomal protein L17-A

Chain d

60S ribosomal protein L37-A