HL_3OW2_040

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3OW2_040 not in the Motif Atlas

Homologous match to HL_4V9F_040

Geometric discrepancy: 0.07

The information below is about HL_4V9F_040

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

3OW2|1|0|G|1628
3OW2|1|0|G|1629
3OW2|1|0|A|1630
3OW2|1|0|A|1631
3OW2|1|0|A|1632
3OW2|1|0|C|1633

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain O

50S ribosomal protein L19e