HL_3P22_001
3D structure
- PDB id
- 3P22 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the ENE, a viral RNA stability element, in complex with A9 RNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.5 Å
Loop
- Sequence
- CGAAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_85603.1
- Basepair signature
- cWW-tSH-F-F
- Number of instances in this motif group
- 304
Unit IDs
3P22|1|A|C|17
3P22|1|A|G|18
3P22|1|A|A|19
3P22|1|A|A|20
3P22|1|A|A|21
3P22|1|A|G|22
Current chains
- Chain A
- Core ENE hairpin from KSHV PAN RNA
Nearby chains
- Chain C
- Core ENE hairpin from KSHV PAN RNA
- Chain F
- oligo(A)9 RNA
Coloring options: