HL_3PIP_078

3D structure

PDB id

3PIP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.45 Å

Loop

Sequence

CGGUGCAAGCUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3PIP|1|X|C|1853
3PIP|1|X|G|1854
3PIP|1|X|G|1855
3PIP|1|X|U|1856
3PIP|1|X|G|1857
3PIP|1|X|C|1858
3PIP|1|X|A|1859
3PIP|1|X|A|1860
3PIP|1|X|G|1861
3PIP|1|X|C|1862
3PIP|1|X|U|1863
3PIP|1|X|G|1864

Current chains

Chain X

RIBOSOMAL 23S RNA

Nearby chains