HL_3R8N_039
3D structure
- PDB id
- 3R8N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of the bacterial ribosome in classical and hybrid states of tRNA binding
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UUUGAUCAUGG
- Length
- 11 nucleotides
- Bulged bases
- 3R8N|1|A|U|14
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3R8N_039 not in the Motif Atlas
- Geometric match to HL_5J7L_001
- Geometric discrepancy: 0.0709
- The information below is about HL_5J7L_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89881.5
- Basepair signature
- cWW-tHW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
3R8N|1|A|U|12
3R8N|1|A|U|13
3R8N|1|A|U|14
3R8N|1|A|G|15
3R8N|1|A|A|16
3R8N|1|A|U|17
3R8N|1|A|C|18
3R8N|1|A|A|19
3R8N|1|A|U|20
3R8N|1|A|G|21
3R8N|1|A|G|22
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain E
- 30S ribosomal protein S5
- Chain L
- 30S ribosomal protein S12
Coloring options: