HL_3R8N_047

3D structure

PDB id

3R8N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of the bacterial ribosome in classical and hybrid states of tRNA binding

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3R8N_047 not in the Motif Atlas

Geometric match to HL_4V9F_009

Geometric discrepancy: 0.1304

The information below is about HL_4V9F_009

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

3R8N|1|A|C|379
3R8N|1|A|G|380
3R8N|1|A|C|381
3R8N|1|A|A|382
3R8N|1|A|A|383
3R8N|1|A|G|384

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16