HL_3R8N_049

3D structure

PDB id

3R8N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of the bacterial ribosome in classical and hybrid states of tRNA binding

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

3R8N|1|A|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3R8N_049 not in the Motif Atlas

Geometric match to HL_5J7L_012

Geometric discrepancy: 0.2522

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

3R8N|1|A|G|462
3R8N|1|A|U|463
3R8N|1|A|U|464
3R8N|1|A|A|465
3R8N|1|A|A|466
3R8N|1|A|U|467
3R8N|1|A|A|468
3R8N|1|A|C|469
3R8N|1|A|C|470

Current chains

Chain A

16S rRNA

Nearby chains