HL_3R8O_047

3D structure

PDB id

3R8O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of the bacterial ribosome in classical and hybrid states of tRNA binding

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

3R8O|1|A|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3R8O_047 not in the Motif Atlas

Geometric match to HL_5J7L_012

Geometric discrepancy: 0.2545

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

3R8O|1|A|G|462
3R8O|1|A|U|463
3R8O|1|A|U|464
3R8O|1|A|A|465
3R8O|1|A|A|466
3R8O|1|A|U|467
3R8O|1|A|A|468
3R8O|1|A|C|469
3R8O|1|A|C|470

Current chains

Chain A

16S rRNA

Nearby chains